ID you entered:  ENSP00000250572

Ensembl protein: ENSP00000250572   

          Protein sequence 
Name: EMR1
Description: egf-like module containing, mucin-like, hormone receptor-like 1 [Source:HGNC Symbol;Acc:HGNC:3336]
Location:
            chr19 p13.3
Gene Ontology:
           Biological process 
           Molecular function 
           Cellular localization 
Interactions:   
          Interaction partner with cancer_related variations :    NA
          Interaction partner with cancer related differentially expressed proteins :    NA

  • Cancer-related variations in CanProVar:
    • NO.csIDvariationchange conservation+Domaincancer namePubMeddata source++validated dbSNP*interface
    1cs20488D110H-1PF07645  Breast Cancer21930502  21930507   BIOMART

    +Conservation of amino acid substitutions are defined here according to the BLOSUM62 matrix, conservative changes were those having a positive or neutral sign in the matrix, whereas non-conservative changes were those having a negative value (Cargill, et al. 1999).
    ++Data sources:  HPI,  COSMIC,  OMIM,  TCGA,  BIOMART,  Greenman2007,  Sjoblom2006,  Ding2008
    *Cross-reference databases: dbSNP
    Interface information was collected from Wang 2012


  • Non-cancer specific variations derived from database dbSNP:

    • NO.dbSNP_IDvariationvalidated
    1rs34176643R2LCluster,Frequency,1000Genome
    2rs200846243S53TCluster
    3rs201462666S53GCluster
    4rs330877A57T1000Genome,Cluster,Frequency
    5rs112217832G92RCluster,Frequency,1000Genome
    6rs35408761V121ICluster,Frequency,1000Genome
    7rs330880S140RHapMap,1000Genome,Cluster,Frequency
    8rs201105150E144*Cluster
    9rs897738D174NHapMap,1000Genome,Cluster,Frequency
    10rs112394897E184DCluster,Frequency,1000Genome
    11rs61733001C197SCluster,Frequency
    12rs143245445S241CCluster,Frequency,1000Genome
    13rs443658N254SHapMap,1000Genome,Cluster,Frequency
    14rs2290635C296SCluster,1000Genome
    15rs370094A298VHapMap,1000Genome,Cluster,Frequency
    16rs139498335Q337*Frequency
    17rs149695793A341TCluster,1000Genome
    18rs145437105T368MCluster,Frequency,1000Genome
    19rs466876T389MCluster,Frequency,1000Genome
    20rs113492206T398MCluster,Frequency,1000Genome
    21rs457857I424VHapMap,1000Genome,Cluster,Frequency
    22rs138712323P426LCluster,1000Genome
    23rs201690943T430MCluster
    24rs138463649G463EFrequency
    25rs375917460I467VCluster
    26rs375917460I467FCluster
    27rs373533K496QCluster,Frequency,1000Genome
    28rs461645I539VHapMap,1000Genome,Cluster,Frequency
    29rs201029019I569VCluster,1000Genome
    30rs7256147V589ICluster,Frequency,1000Genome
    31rs117242880A604VCluster,Frequency,1000Genome
    32rs2229769F626CCluster,Frequency
    33rs143015514P656LFrequency
    34rs10406580V659LCluster,Frequency,1000Genome
    35rs149410886R676CCluster
    36rs186352511I809T1000Genome
    37rs146614136P815TCluster,Frequency,1000Genome


  • Cancer-related differential expression proteins derived from database dbDEPC:


    • No entry in dbDEPC was found



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