ID you entered:  ENSP00000250872

Ensembl protein: ENSP00000250872   

          Protein sequence 
Name: SBNO2
Description: strawberry notch homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:29158]
Location:
            chr19 p13.3
Gene Ontology:
           Biological process 
           Molecular function 
           Cellular localization 
Interactions:   
          Interaction partner with cancer_related variations :  (  pvalue=0.724056, hypergeometric test )
                 1 
          Interaction partner with cancer related differentially expressed proteins :    NA
                         

  • Cancer-related variations in CanProVar:
    • NO.csIDvariationchange conservation+Domaincancer namePubMeddata source++validated dbSNP*interface
    1cs35372Q28*-4Breast Cancer21930502  21930507   BIOMART

    +Conservation of amino acid substitutions are defined here according to the BLOSUM62 matrix, conservative changes were those having a positive or neutral sign in the matrix, whereas non-conservative changes were those having a negative value (Cargill, et al. 1999).
    ++Data sources:  HPI,  COSMIC,  OMIM,  TCGA,  BIOMART,  Greenman2007,  Sjoblom2006,  Ding2008
    *Cross-reference databases: dbSNP
    Interface information was collected from Wang 2012


  • Non-cancer specific variations derived from database dbSNP:

    • NO.dbSNP_IDvariationvalidated
    1rs112872546R25Q1000Genome
    2rs112872546R25P1000Genome
    3rs2024093L143PHapMap,1000Genome,Cluster,Frequency
    4rs182195916G354W1000Genome
    5rs192343149E405Q1000Genome
    6rs187430722E474*1000Genome
    7rs183150602E474V1000Genome
    8rs186815421A623V1000Genome
    9rs11880694A1124VCluster,1000Genome,HapMap


  • Cancer-related differential expression proteins derived from database dbDEPC:


    • No entry in dbDEPC was found



    [ continue search ]



    Dr. Jing Li's Group

    ©2015 Menghuan Zhang, Jing Li