ID you entered:  ENSP00000316772

Ensembl protein: ENSP00000316772   

          Protein sequence 
Name: HMHA1
Description: histocompatibility (minor) HA-1 [Source:HGNC Symbol;Acc:HGNC:17102]
Location:
            chr19 p13.3
Gene Ontology:
           Biological process 
           Molecular function 
           Cellular localization 
Interactions:   
          Interaction partner with cancer_related variations :    NA
          Interaction partner with cancer related differentially expressed proteins :    NA

  • Cancer-related variations in CanProVar:
    • NO.csIDvariationchange conservation+Domaincancer namePubMeddata source++validated dbSNP*interface
    1cs86780M367I1Lung Cancer20016488   COSMIC
    2cs85806C528S-1Ovarian Cancer21720365   COSMIC
    3cs69915G1120S0Breast Cancer21930502  21930507   BIOMART

    +Conservation of amino acid substitutions are defined here according to the BLOSUM62 matrix, conservative changes were those having a positive or neutral sign in the matrix, whereas non-conservative changes were those having a negative value (Cargill, et al. 1999).
    ++Data sources:  HPI,  COSMIC,  OMIM,  TCGA,  BIOMART,  Greenman2007,  Sjoblom2006,  Ding2008
    *Cross-reference databases: dbSNP
    Interface information was collected from Wang 2012


  • Non-cancer specific variations derived from database dbSNP:

    • NO.dbSNP_IDvariationvalidated
    1rs201802065R89WCluster
    2rs1801284R139HCluster,Frequency,1000Genome
    3rs200737466V160ICluster,1000Genome
    4rs145027652T209MFrequency
    5rs2074442E259DHapMap,1000Genome,Cluster,Frequency
    6rs75236288A426VCluster,Frequency,1000Genome
    7rs7251797S439GHapMap,1000Genome,Cluster,Frequency
    8rs141510861T501IFrequency
    9rs36084354M515ICluster,Frequency,1000Genome
    10rs150994364H614QFrequency
    11rs149053443E657DCluster,1000Genome
    12rs149442520H693QFrequency
    13rs144254022R848HCluster,1000Genome
    14rs34569196A886PCluster,Frequency,1000Genome
    15rs140579661P978LFrequency
    16rs146827391E1014QFrequency
    17rs138719751E1014AFrequency
    18rs112975635G1019RCluster,Frequency
    19rs139988914G1073SFrequency
    20rs61734935E1090GCluster,Frequency,1000Genome
    21rs148933347G1092SFrequency
    22rs201763617N1106SCluster
    23rs149452932T1124IFrequency
    24rs137868278T1124PFrequency


  • Cancer-related differential expression proteins derived from database dbDEPC:


    • No entry in dbDEPC was found



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