ID you entered:  ENSP00000341911

Ensembl protein: ENSP00000341911   

          Protein sequence 
Name: PALM
Description: paralemmin [Source:HGNC Symbol;Acc:HGNC:8594]
Location:
            chr19 p13.3
Gene Ontology:
           Biological process 
           Molecular function 
           Cellular localization 
Interactions:   
          Interaction partner with cancer_related variations :  (  pvalue=0.724056, hypergeometric test )
                 1 
          Interaction partner with cancer related differentially expressed proteins :    NA
                         

  • Cancer-related variations in CanProVar:
    • NO.csIDvariationchange conservation+Domaincancer namePubMeddata source++validated dbSNP*interface
    1cs62188A239T0PF03285  Skin Cancer21984974   COSMIC
    2cs94909P297S-1PF03285  Skin Cancer21984974   COSMIC
    3cs73172R380C-3PF03285  Head and Neck Cancer21798893   COSMIC

    +Conservation of amino acid substitutions are defined here according to the BLOSUM62 matrix, conservative changes were those having a positive or neutral sign in the matrix, whereas non-conservative changes were those having a negative value (Cargill, et al. 1999).
    ++Data sources:  HPI,  COSMIC,  OMIM,  TCGA,  BIOMART,  Greenman2007,  Sjoblom2006,  Ding2008
    *Cross-reference databases: dbSNP
    Interface information was collected from Wang 2012


  • Non-cancer specific variations derived from database dbSNP:

    • NO.dbSNP_IDvariationvalidated
    1rs144513487A104TFrequency
    2rs1050457T107ACluster,Frequency,1000Genome
    3rs117990313A114TFrequency,1000Genome
    4rs139966536R119WFrequency
    5rs143530661G144SCluster,Frequency
    6rs149788617R196QFrequency
    7rs148346970G223RFrequency
    8rs137941376E234KFrequency
    9rs188184317A283V1000Genome
    10rs199827121G286SCluster
    11rs201780424P296LCluster,1000Genome
    12rs201780424P297LCluster,1000Genome
    13rs371457241K315RCluster
    14rs145499551A347SCluster
    15rs145499551A348SCluster


  • Cancer-related differential expression proteins derived from database dbDEPC:


    • No entry in dbDEPC was found



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