ID you entered:  ENSP00000405974

Ensembl protein: ENSP00000405974   

          Protein sequence 
Name: EMR1
Description: egf-like module containing, mucin-like, hormone receptor-like 1 [Source:HGNC Symbol;Acc:HGNC:3336]
Location:
            chr19 p13.3
Gene Ontology:
           Biological process 
           Molecular function 
           Cellular localization 
Interactions:   
          Interaction partner with cancer_related variations :    NA
          Interaction partner with cancer related differentially expressed proteins :    NA

  • Cancer-related variations in CanProVar:
    • NO.csIDvariationchange conservation+Domaincancer namePubMeddata source++validated dbSNP*interface
    1cs20488D110H-1PF07645  Breast Cancer21930502  21930507   BIOMART

    +Conservation of amino acid substitutions are defined here according to the BLOSUM62 matrix, conservative changes were those having a positive or neutral sign in the matrix, whereas non-conservative changes were those having a negative value (Cargill, et al. 1999).
    ++Data sources:  HPI,  COSMIC,  OMIM,  TCGA,  BIOMART,  Greenman2007,  Sjoblom2006,  Ding2008
    *Cross-reference databases: dbSNP
    Interface information was collected from Wang 2012


  • Non-cancer specific variations derived from database dbSNP:

    • NO.dbSNP_IDvariationvalidated
    1rs34176643R2LCluster,Frequency,1000Genome
    2rs200846243S53TCluster
    3rs201462666S53GCluster
    4rs330877A57T1000Genome,Cluster,Frequency
    5rs112217832G92RCluster,Frequency,1000Genome
    6rs35408761V121ICluster,Frequency,1000Genome
    7rs139498335Q160*Frequency
    8rs149695793A164TCluster,1000Genome
    9rs145437105T191MCluster,Frequency,1000Genome
    10rs466876T212MCluster,Frequency,1000Genome
    11rs113492206T221MCluster,Frequency,1000Genome
    12rs457857I247VHapMap,1000Genome,Cluster,Frequency
    13rs138712323P249LCluster,1000Genome
    14rs201690943T253MCluster
    15rs138463649G286EFrequency
    16rs375917460I290VCluster
    17rs375917460I290FCluster
    18rs373533K319QCluster,Frequency,1000Genome
    19rs461645I362VHapMap,1000Genome,Cluster,Frequency
    20rs201029019I392VCluster,1000Genome
    21rs7256147V412ICluster,Frequency,1000Genome
    22rs149745999A443VCluster,1000Genome
    23rs61733003I444VCluster,Frequency,1000Genome
    24rs148887520R451CFrequency
    25rs188529490A477T1000Genome
    26rs117242880A492VCluster,Frequency,1000Genome
    27rs2229769F514CCluster,Frequency
    28rs143015514P544LFrequency
    29rs10406580V547LCluster,Frequency,1000Genome
    30rs149410886R564CCluster
    31rs186352511I697T1000Genome
    32rs146614136P703TCluster,Frequency,1000Genome


  • Cancer-related differential expression proteins derived from database dbDEPC:


    • No entry in dbDEPC was found



    [ continue search ]



    Dr. Jing Li's Group

    ©2015 Menghuan Zhang, Jing Li