Protein sequence | ID you entered: ENSP00000326940 Ensembl protein: ENSP00000326940 Protein sequence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Name: TNFSF14 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Description: tumor necrosis factor (ligand) superfamily, member 14 [Source:HGNC Symbol;Acc:11930] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Location: | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
chr19 p13.3 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Gene Ontology: | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Biological process  Molecular function  Cellular localization  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Interactions: ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Interaction partner with cancer_related variations : ( pvalue=0.0754803, hypergeometric test ) 8  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Interaction partner with cancer related differentially expressed proteins : NA | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| NO. | csID | variation | change conservation+ | Domain | cancer name | PubMed | data source++ | validated dbSNP* | interface |
|---|---|---|---|---|---|---|---|---|---|
| 1 | cs37979 | L62F | 0 | Breast Cancer | 21930502  21930507   | BIOMART |
+Conservation of amino acid substitutions are defined here according to the BLOSUM62 matrix, conservative changes were those having a positive or neutral sign in the matrix, whereas non-conservative changes were those having a negative value (Cargill, et al. 1999). ++Data sources: HPI, COSMIC, OMIM, TCGA, BIOMART, Greenman2007, Sjoblom2006, Ding2008 *Cross-reference databases: dbSNP Interface information was collected from Wang 2012 |
| NO. | dbSNP_ID | variation | validated |
|---|---|---|---|
| 1 | rs143389888 | S4I | Cluster,Frequency,1000Genome |
| 2 | rs2291667 | S32L | Cluster,Frequency,1000Genome |
| 3 | rs148549412 | A41V | 1000Genome |
| 4 | rs143854617 | E55K | Frequency |
| 5 | rs191014745 | I126V | 1000Genome |
| 6 | rs344560 | K178E | Cluster,Frequency,1000Genome |
| 7 | rs150171386 | R182H | Cluster,Frequency,1000Genome |
No entry in dbDEPC was found |
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